Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1643 domain-containing protein | DW204_07330 | Not Available | Negative | 1818769 - 1819398 | 23860.8 |
| xre family transcriptional regulator | DW204_07335 | Not Available | Positive | 1819491 - 1819724 | 8788.65 |
| wyl domain-containing protein | DW204_07340 | Not Available | Negative | 1819850 - 1820758 | 35279.6 |
| Trna-gln | Not Available | Not Available | Positive | 1821292 - 1821365 | Not Available |
| peptidase s41 | DW204_07350 | Not Available | Positive | 1821496 - 1824750 | 122207.0 |
| tyrosine--trna ligase | DW204_07355 | Not Available | Negative | 1825071 - 1826363 | 48414.0 |
| deoxyribonuclease | DW204_07360 | Not Available | Negative | 1826443 - 1827099 | 25040.7 |
| membrane protein insertion efficiency factor yidd | DW204_07365 | Not Available | Negative | 1827115 - 1827336 | 8424.46 |
| ribonuclease p protein component | DW204_07370 | Not Available | Negative | 1827333 - 1827728 | 14874.5 |
| uroporphyrinogen-iii synthase | DW204_07375 | Not Available | Negative | 1827803 - 1828549 | 28505.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

