Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ntpase | DW204_07280 | Not Available | Negative | 1807727 - 1809298 | 60270.5 |
| site-specific integrase | DW204_07285 | Not Available | Positive | 1810289 - 1811653 | 52673.4 |
| hypothetical protein | DW204_07290 | Not Available | Positive | 1811658 - 1812977 | 51501.8 |
| dna-binding protein | DW204_07295 | Not Available | Positive | 1813101 - 1813388 | 10707.1 |
| duf3987 domain-containing protein | DW204_07300 | Not Available | Positive | 1813394 - 1814713 | 50709.5 |
| hypothetical protein | DW204_07305 | Not Available | Positive | 1814688 - 1815926 | 47033.4 |
| hypothetical protein | DW204_07310 | Not Available | Negative | 1815955 - 1816536 | 22685.8 |
| hypothetical protein | DW204_07315 | Not Available | Negative | 1816533 - 1816862 | 12454.1 |
| hypothetical protein | DW204_07320 | Not Available | Negative | 1816978 - 1817385 | 15822.8 |
| hypothetical protein | DW204_07325 | Not Available | Negative | 1817387 - 1818772 | 52641.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

