Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna cytosine methyltransferase | DW204_07130 | Not Available | Positive | 1771089 - 1772213 | 42918.0 |
| hypothetical protein | DW204_07135 | Not Available | Positive | 1772222 - 1773814 | 60526.1 |
| duf2357 domain-containing protein | DW204_07140 | Not Available | Positive | 1773814 - 1776012 | 85789.4 |
| dna mismatch endonuclease vsr | DW204_07145 | Not Available | Positive | 1776019 - 1776537 | 20719.1 |
| hypothetical protein | DW204_07150 | Not Available | Positive | 1776588 - 1777415 | 31269.9 |
| nerd domain-containing protein | DW204_07155 | Not Available | Positive | 1777415 - 1778191 | 30181.9 |
| atp-dependent helicase | DW204_07160 | Not Available | Positive | 1778285 - 1779601 | 49250.8 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | DW204_07165 | Not Available | Positive | 1779853 - 1780923 | 39777.9 |
| 3-phosphoglycerate dehydrogenase | DW204_07170 | Not Available | Positive | 1780998 - 1781921 | 33501.5 |
| duf1015 domain-containing protein | DW204_07175 | Not Available | Positive | 1781943 - 1783190 | 46998.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

