Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_06840 | Not Available | Negative | 1705876 - 1706145 | 10266.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | DW204_06845 | Not Available | Negative | 1706206 - 1707375 | 42861.3 |
| s-layer protein | DW204_06850 | Not Available | Negative | 1707458 - 1709116 | 62998.9 |
| carbon starvation protein a | DW204_06855 | Not Available | Positive | 1709294 - 1710724 | 52376.6 |
| hypothetical protein | DW204_06860 | Not Available | Positive | 1710792 - 1712033 | 45930.7 |
| glycoside hydrolase family 28 protein | DW204_06865 | Not Available | Negative | 1712098 - 1713483 | 52716.0 |
| rhamnogalacturonan acetylesterase | DW204_06870 | Not Available | Positive | 1713763 - 1714992 | 46592.8 |
| rhamnogalacturonan acetylesterase | DW204_06875 | Not Available | Positive | 1715225 - 1716856 | 61204.5 |
| hypothetical protein | DW204_06880 | Not Available | Negative | 1716940 - 1717235 | 11770.1 |
| sigma-54-dependent fis family transcriptional regulator | DW204_06885 | Not Available | Positive | 1717600 - 1718928 | 49579.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

