Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum formation initiator family protein | DW204_06790 | Not Available | Positive | 1697060 - 1697362 | 12038.6 |
| hypothetical protein | DW204_06795 | Not Available | Positive | 1697362 - 1697703 | 12916.5 |
| ai-2e family transporter | DW204_06800 | Not Available | Positive | 1697728 - 1698744 | 37775.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DW204_06805 | Not Available | Negative | 1698731 - 1699642 | 35417.8 |
| hypothetical protein | DW204_06810 | Not Available | Negative | 1699753 - 1700310 | 21570.5 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DW204_06815 | Not Available | Negative | 1700356 - 1701123 | 27775.7 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DW204_06820 | Not Available | Negative | 1701125 - 1702510 | 51551.7 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DW204_06825 | Not Available | Negative | 1702515 - 1703555 | 37244.9 |
| orotidine-5'-phosphate decarboxylase | DW204_06830 | Not Available | Negative | 1703826 - 1704650 | 30988.3 |
| peptide chain release factor 1 | DW204_06835 | Not Available | Negative | 1704721 - 1705830 | 41641.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

