Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine--trna ligase | DW204_06740 | Not Available | Negative | 1686071 - 1688689 | 97075.0 |
| m23 family peptidase | DW204_06745 | Not Available | Positive | 1688823 - 1689788 | 36401.8 |
| merr family transcriptional regulator | DW204_06750 | Not Available | Positive | 1689804 - 1690151 | 13701.8 |
| endonuclease iii | DW204_06755 | Not Available | Negative | 1690205 - 1690852 | 24218.7 |
| magnesium and cobalt transport protein cora | DW204_06760 | Not Available | Negative | 1690887 - 1691927 | 40370.7 |
| 4fe-4s dicluster domain-containing protein | DW204_06765 | Not Available | Negative | 1691940 - 1692821 | 33032.3 |
| vut family protein | DW204_06770 | Not Available | Positive | 1693194 - 1693880 | 25124.7 |
| 7-cyano-7-deazaguanine synthase quec | DW204_06775 | Not Available | Positive | 1693886 - 1694551 | 24902.9 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DW204_06780 | Not Available | Positive | 1694554 - 1695012 | 17906.5 |
| dna polymerase iii subunit gamma/tau | DW204_06785 | Not Available | Negative | 1695101 - 1696939 | 68681.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

