Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | DW204_06675 | Not Available | Positive | 1672348 - 1672935 | 22221.3 |
| biopolymer transporter exbd | DW204_06680 | Not Available | Positive | 1672938 - 1673402 | 17900.0 |
| mate family efflux transporter | DW204_06685 | Not Available | Negative | 1673606 - 1674910 | 48707.5 |
| Trna-leu | Not Available | Not Available | Positive | 1675036 - 1675117 | Not Available |
| peptidase s41 | DW204_06695 | Not Available | Negative | 1675191 - 1676216 | 38966.8 |
| duf3316 domain-containing protein | DW204_06700 | Not Available | Negative | 1676218 - 1677066 | 32209.4 |
| dna gyrase/topoisomerase iv subunit a | DW204_06705 | Not Available | Negative | 1677073 - 1679718 | 101091.0 |
| hypothetical protein | DW204_06710 | Not Available | Negative | 1679957 - 1680544 | 22255.4 |
| abc transporter permease | DW204_06715 | Not Available | Negative | 1680557 - 1681093 | 19658.6 |
| mate family efflux transporter | DW204_06735 | Not Available | Negative | 1684582 - 1685925 | 48757.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

