Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | DW204_06625 | Not Available | Positive | 1663762 - 1665090 | 51077.2 |
| 6-phosphofructokinase | DW204_06630 | Not Available | Negative | 1665176 - 1666156 | 35283.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DW204_06635 | Not Available | Negative | 1666235 - 1667098 | 32561.2 |
| (d)cmp kinase | DW204_06640 | Not Available | Negative | 1667085 - 1667783 | 26136.2 |
| energy transducer tonb | DW204_06645 | Not Available | Positive | 1668200 - 1668886 | 25865.1 |
| polyprenyl synthetase family protein | DW204_06650 | Not Available | Positive | 1668964 - 1669947 | 37518.8 |
| tatd family deoxyribonuclease | DW204_06655 | Not Available | Positive | 1669952 - 1670743 | 29913.8 |
| Trna-ser | Not Available | Not Available | Positive | 1670882 - 1670972 | Not Available |
| mota/tolq/exbb proton channel family protein | DW204_06665 | Not Available | Positive | 1671032 - 1671832 | 28434.3 |
| hypothetical protein | DW204_06670 | Not Available | Positive | 1671841 - 1672305 | 16389.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

