Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter | DW204_06575 | Not Available | Negative | 1647740 - 1649080 | 49650.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | DW204_06580 | Not Available | Negative | 1649136 - 1649939 | 30478.1 |
| upf0104 family protein | DW204_06585 | Not Available | Positive | 1650015 - 1651022 | 37108.3 |
| aminoacyl-histidine dipeptidase | DW204_06590 | Not Available | Positive | 1651058 - 1652515 | 53440.8 |
| alpha-2-macroglobulin | DW204_06595 | Not Available | Positive | 1652699 - 1658311 | 212195.0 |
| duf1573 domain-containing protein | DW204_06600 | Not Available | Positive | 1658453 - 1659538 | 39985.7 |
| methylmalonyl co-a mutase-associated gtpase meab | DW204_06605 | Not Available | Positive | 1659547 - 1660653 | 40821.9 |
| polyamine abc transporter atp-binding protein | DW204_06610 | Not Available | Positive | 1660774 - 1662174 | 52545.5 |
| abc transporter permease | DW204_06615 | Not Available | Positive | 1662171 - 1662968 | 29810.1 |
| abc transporter permease | DW204_06620 | Not Available | Positive | 1662962 - 1663753 | 28716.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

