Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | DW204_06525 | Not Available | Negative | 1632069 - 1633385 | 49116.2 |
| carbohydrate kinase | DW204_06530 | Not Available | Negative | 1633422 - 1634909 | 53309.4 |
| nudix hydrolase | DW204_06535 | Not Available | Negative | 1634930 - 1635652 | 28294.4 |
| mbl fold metallo-hydrolase | DW204_06540 | Not Available | Positive | 1636015 - 1636776 | 28730.8 |
| hypothetical protein | DW204_06545 | Not Available | Negative | 1636902 - 1637885 | 36733.3 |
| hypothetical protein | DW204_06550 | Not Available | Negative | 1637908 - 1640658 | 104936.0 |
| endonuclease/exonuclease/phosphatase family protein | DW204_06555 | Not Available | Negative | 1640676 - 1641716 | 39430.2 |
| dna/rna non-specific endonuclease | DW204_06560 | Not Available | Negative | 1641729 - 1642925 | 45046.6 |
| hypothetical protein | DW204_06565 | Not Available | Negative | 1642944 - 1645322 | 85287.4 |
| duf349 domain-containing protein | DW204_06570 | Not Available | Negative | 1645629 - 1647434 | 70156.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

