Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW204_06470 | Not Available | Positive | 1622607 - 1623074 | 17983.3 |
| hypothetical protein | DW204_06480 | Not Available | Negative | 1623789 - 1624025 | 9088.98 |
| pyridoxal phosphate-dependent aminotransferase | DW204_06485 | Not Available | Negative | 1624341 - 1625534 | 43433.1 |
| bax inhibitor (bi)-1/ycca family protein | DW204_06490 | Not Available | Negative | 1625620 - 1626321 | 25957.7 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DW204_06495 | Not Available | Negative | 1626334 - 1627548 | 44953.2 |
| yjgp/yjgq family permease | DW204_06500 | Not Available | Negative | 1627564 - 1629456 | 72495.1 |
| hypothetical protein | DW204_06505 | Not Available | Negative | 1629534 - 1629917 | 15035.6 |
| Trna-met | Not Available | Not Available | Positive | 1630237 - 1630313 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1630368 - 1630444 | Not Available |
| d-xylose transporter xyle | DW204_06520 | Not Available | Negative | 1630489 - 1631970 | 54155.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

