Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5041 domain-containing protein | DW204_06415 | Not Available | Negative | 1606093 - 1606206 | 4179.06 |
| duf4858 domain-containing protein | DW204_06420 | Not Available | Negative | 1606385 - 1606918 | 20432.1 |
| tonb-dependent receptor | DW204_06430 | Not Available | Positive | 1608105 - 1611038 | 109801.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_06435 | Not Available | Positive | 1611066 - 1612571 | 57610.5 |
| duf4929 domain-containing protein | DW204_06440 | Not Available | Positive | 1612608 - 1613555 | 35573.1 |
| duf5003 domain-containing protein | DW204_06445 | Not Available | Positive | 1613585 - 1615222 | 60927.9 |
| duf4458 domain-containing protein | DW204_06450 | Not Available | Positive | 1615244 - 1617919 | 100840.0 |
| hypothetical protein | DW204_06455 | Not Available | Positive | 1617938 - 1619698 | 66931.8 |
| protease | DW204_06460 | Not Available | Positive | 1619714 - 1621768 | 73897.3 |
| duf1573 domain-containing protein | DW204_06465 | Not Available | Positive | 1621787 - 1622590 | 29541.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

