Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DW204_06365 | Not Available | Positive | 1594776 - 1595354 | 21494.4 |
| amp-binding protein | DW204_06370 | Not Available | Positive | 1595378 - 1597030 | 62528.7 |
| hypothetical protein | DW204_06375 | Not Available | Negative | 1597101 - 1597760 | 24408.8 |
| tetratricopeptide repeat protein | DW204_06380 | Not Available | Positive | 1597906 - 1598859 | 35555.6 |
| putative c-s lyase | DW204_06385 | Not Available | Negative | 1598940 - 1600109 | 44031.2 |
| prephenate dehydratase | DW204_06390 | Not Available | Positive | 1600462 - 1601304 | 31698.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DW204_06395 | Not Available | Positive | 1601279 - 1602469 | 45339.4 |
| 3-deoxy-7-phosphoheptulonate synthase | DW204_06400 | Not Available | Positive | 1602494 - 1603564 | 40163.6 |
| prephenate dehydrogenase | DW204_06405 | Not Available | Positive | 1603577 - 1604350 | 29479.7 |
| hypothetical protein | DW204_06410 | Not Available | Negative | 1604434 - 1605936 | 58202.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

