Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit s | DW204_06315 | Not Available | Positive | 1582158 - 1583423 | 47974.1 |
| type i restriction endonuclease subunit s | DW204_06320 | Not Available | Negative | 1583418 - 1583867 | 17203.7 |
| integrase | DW204_06325 | Not Available | Positive | 1583949 - 1584752 | 31526.2 |
| restriction endonuclease subunit s | DW204_06330 | Not Available | Negative | 1584776 - 1586185 | 52892.9 |
| duf1016 family protein | DW204_06335 | Not Available | Negative | 1586191 - 1587342 | 44278.5 |
| sam-dependent dna methyltransferase | DW204_06340 | Not Available | Negative | 1587347 - 1588780 | 53526.0 |
| dead/deah box helicase | DW204_06345 | Not Available | Negative | 1588785 - 1591490 | 102851.0 |
| hypothetical protein | DW204_06350 | Not Available | Positive | 1592201 - 1593172 | 37233.5 |
| n-acetylmuramoyl-l-alanine amidase | DW204_06355 | Not Available | Negative | 1593202 - 1594002 | 30401.8 |
| tlpa family protein disulfide reductase | DW204_06360 | Not Available | Negative | 1594002 - 1594538 | 19873.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

