Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase p family protein | DW204_06250 | Not Available | Positive | 1565732 - 1567123 | 51979.5 |
| aminopeptidase | DW204_06255 | Not Available | Positive | 1567164 - 1568357 | 44616.8 |
| single-stranded-dna-specific exonuclease recj | DW204_06260 | Not Available | Positive | 1568592 - 1570313 | 64823.4 |
| recq family atp-dependent dna helicase | DW204_06265 | Not Available | Positive | 1570320 - 1572215 | 73471.3 |
| alpha-amlyase | DW204_06285 | Not Available | Negative | 1576630 - 1576881 | 9440.39 |
| formate-dependent phosphoribosylglycinamide formyltransferase | DW204_06290 | Not Available | Negative | 1576995 - 1578164 | 43013.6 |
| meta domain-containing protein | DW204_06295 | Not Available | Negative | 1578241 - 1579038 | 28323.7 |
| saccharopine dehydrogenase family protein | DW204_06300 | Not Available | Positive | 1579215 - 1580408 | 44889.3 |
| thioredoxin-dependent thiol peroxidase | DW204_06305 | Not Available | Positive | 1580503 - 1580952 | 16970.4 |
| recombinase reca | DW204_06310 | Not Available | Positive | 1580956 - 1582005 | 37843.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

