Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DW204_06150 | Not Available | Positive | 1544720 - 1545025 | 11724.1 |
| rhum protein | DW204_06155 | Not Available | Negative | 1545103 - 1545465 | 13614.5 |
| site-specific integrase | DW204_06160 | Not Available | Negative | 1545477 - 1546712 | 47891.2 |
| hypothetical protein | DW204_06165 | Not Available | Positive | 1546828 - 1547046 | 8348.89 |
| hybrid sensor histidine kinase/response regulator | DW204_06170 | Not Available | Negative | 1547260 - 1551273 | 153225.0 |
| cytochrome d ubiquinol oxidase subunit ii | DW204_06175 | Not Available | Negative | 1551425 - 1552576 | 43443.3 |
| cytochrome ubiquinol oxidase subunit i | DW204_06180 | Not Available | Negative | 1552610 - 1554106 | 55638.5 |
| duf4492 domain-containing protein | DW204_06185 | Not Available | Negative | 1554148 - 1554366 | 8826.13 |
| tolc family protein | DW204_06190 | Not Available | Positive | 1554509 - 1555852 | 50521.6 |
| efflux rnd transporter periplasmic adaptor subunit | DW204_06195 | Not Available | Positive | 1555865 - 1557088 | 44107.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

