Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar o-acetyltransferase | DW204_06100 | Not Available | Negative | 1529935 - 1530492 | 20753.1 |
| tetracycline resistance ribosomal protection protein tet(q) | DW204_06105 | Not Available | Negative | 1530752 - 1532653 | 71219.5 |
| dna methylase | DW204_06110 | Not Available | Negative | 1533310 - 1539126 | 220015.0 |
| duf1896 domain-containing protein | DW204_06115 | Not Available | Negative | 1539116 - 1539703 | 22268.0 |
| type ia dna topoisomerase | DW204_06120 | Not Available | Negative | 1539731 - 1541818 | 77608.9 |
| duf4099 domain-containing protein | DW204_06125 | Not Available | Negative | 1541879 - 1543450 | 59859.2 |
| dna-binding protein | DW204_06130 | Not Available | Negative | 1543471 - 1543821 | 13925.0 |
| dna-binding protein | DW204_06135 | Not Available | Negative | 1543825 - 1544187 | 14059.1 |
| hypothetical protein | DW204_06140 | Not Available | Positive | 1544186 - 1544383 | 7273.61 |
| dna-binding protein | DW204_06145 | Not Available | Positive | 1544389 - 1544688 | 11590.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

