Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgnh/gdsl hydrolase family protein | DW204_06045 | Not Available | Positive | 1513020 - 1513865 | 31717.9 |
| sulfotransferase | DW204_06050 | Not Available | Positive | 1513907 - 1515013 | 43671.5 |
| hypothetical protein | DW204_06060 | Not Available | Negative | 1516481 - 1518346 | 71628.4 |
| glycoside hydrolase family 27 protein | DW204_06065 | Not Available | Negative | 1518531 - 1519904 | 52258.0 |
| glycoside hydrolase family 97 protein | DW204_06070 | Not Available | Negative | 1519933 - 1521873 | 73082.7 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_06075 | Not Available | Negative | 1521999 - 1523771 | 67350.4 |
| susc/raga family tonb-linked outer membrane protein | DW204_06080 | Not Available | Negative | 1523783 - 1527064 | 122730.0 |
| duf4974 domain-containing protein | DW204_06085 | Not Available | Negative | 1527301 - 1528311 | 38681.9 |
| rna polymerase sigma-70 factor | DW204_06090 | Not Available | Negative | 1528378 - 1528968 | 23123.8 |
| hypothetical protein | DW204_06095 | Not Available | Negative | 1528993 - 1529658 | 25498.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

