Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase | DW204_00470 | Not Available | Negative | 131959 - 135375 | 128441.0 |
| arylsulfatase | DW204_00475 | Not Available | Negative | 135664 - 137220 | 57648.4 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_00480 | Not Available | Negative | 137241 - 138881 | 62501.4 |
| susc/raga family tonb-linked outer membrane protein | DW204_00485 | Not Available | Negative | 138888 - 142193 | 121260.0 |
| rna polymerase sigma-70 factor | DW204_00495 | Not Available | Negative | 143495 - 144091 | 23697.3 |
| duf3836 domain-containing protein | DW204_00500 | Not Available | Positive | 144570 - 144890 | 12151.5 |
| cpbp family intramembrane metalloprotease | DW204_00505 | Not Available | Positive | 144916 - 145749 | 30451.8 |
| duf2975 domain-containing protein | DW204_00510 | Not Available | Positive | 145779 - 146426 | 23887.8 |
| duf2975 domain-containing protein | DW204_00515 | Not Available | Positive | 146438 - 146890 | 16922.2 |
| hypothetical protein | DW204_00520 | Not Available | Positive | 146905 - 147141 | 9378.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

