Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2752 domain-containing protein | DW204_05945 | Not Available | Negative | 1489419 - 1489793 | 14275.8 |
| cd225/dispanin family protein | DW204_05950 | Not Available | Negative | 1489798 - 1490058 | 9234.51 |
| duf4339 domain-containing protein | DW204_05955 | Not Available | Negative | 1490081 - 1490542 | 16768.5 |
| ump kinase | DW204_05960 | Not Available | Positive | 1490719 - 1491429 | 25493.2 |
| histidine phosphatase family protein | DW204_05965 | Not Available | Negative | 1491495 - 1492019 | 19628.5 |
| ribosome recycling factor | DW204_05970 | Not Available | Positive | 1492194 - 1492754 | 20740.1 |
| ribosome small subunit-dependent gtpase a | DW204_05975 | Not Available | Positive | 1492790 - 1493767 | 36558.7 |
| tolc family protein | DW204_05980 | Not Available | Negative | 1493843 - 1495285 | 53912.9 |
| acrb/acrd/acrf family protein | DW204_05985 | Not Available | Negative | 1495275 - 1498415 | 115330.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW204_05990 | Not Available | Negative | 1498422 - 1499570 | 43861.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

