Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-hydrate dehydratase | DW204_05885 | Not Available | Positive | 1478466 - 1479983 | 54782.9 |
| duf4831 family protein | DW204_05890 | Not Available | Positive | 1479992 - 1481032 | 38417.9 |
| phosphatidylserine decarboxylase family protein | DW204_05905 | Not Available | Positive | 1484461 - 1485147 | 25918.9 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DW204_05910 | Not Available | Positive | 1485188 - 1485892 | 26041.4 |
| duf4834 family protein | DW204_05915 | Not Available | Positive | 1485947 - 1486234 | 11071.4 |
| nucleoside deaminase | DW204_05920 | Not Available | Negative | 1486239 - 1486673 | 15717.0 |
| hypothetical protein | DW204_05925 | Not Available | Negative | 1486677 - 1486910 | 9451.57 |
| endonuclease | DW204_05930 | Not Available | Positive | 1486984 - 1487352 | 13948.6 |
| biotin--[acetyl-coa-carboxylase] ligase | DW204_05935 | Not Available | Positive | 1487373 - 1488110 | 28134.2 |
| mate family efflux transporter | DW204_05940 | Not Available | Positive | 1488107 - 1489414 | 48589.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

