Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DW204_05765 | Not Available | Negative | 1451746 - 1452738 | 37568.9 |
| duf2264 domain-containing protein | DW204_05770 | Not Available | Negative | 1452865 - 1455174 | 89279.9 |
| neuraminidase | DW204_05775 | Not Available | Negative | 1455190 - 1456467 | 48588.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DW204_05780 | Not Available | Negative | 1456703 - 1457995 | 47260.4 |
| tryptophan--trna ligase | DW204_05785 | Not Available | Negative | 1458000 - 1459094 | 41335.7 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DW204_05790 | Not Available | Positive | 1459250 - 1462474 | 120031.0 |
| tlpa family protein disulfide reductase | DW204_05795 | Not Available | Negative | 1462640 - 1463158 | 19445.8 |
| yaaa family protein | DW204_05800 | Not Available | Positive | 1463272 - 1464030 | 29642.8 |
| hypothetical protein | DW204_05805 | Not Available | Negative | 1464095 - 1465378 | 45427.6 |
| tonb-dependent receptor | DW204_05810 | Not Available | Negative | 1465436 - 1468126 | 100570.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

