Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DW204_05715 | Not Available | Negative | 1433734 - 1434570 | 31967.6 |
| endonuclease | DW204_05720 | Not Available | Positive | 1434737 - 1435606 | 32817.7 |
| abc transporter atp-binding protein | DW204_05725 | Not Available | Negative | 1435675 - 1436325 | 23639.8 |
| trna threonylcarbamoyladenosine dehydratase | DW204_05730 | Not Available | Negative | 1436332 - 1437057 | 26869.8 |
| cation:proton antiporter | DW204_05735 | Not Available | Negative | 1437054 - 1439198 | 80398.5 |
| aspartate-semialdehyde dehydrogenase | DW204_05740 | Not Available | Positive | 1439388 - 1440398 | 37199.6 |
| ragb/susd family nutrient uptake outer membrane protein | DW204_05745 | Not Available | Negative | 1440788 - 1442815 | 77058.6 |
| tonb-dependent receptor | DW204_05750 | Not Available | Negative | 1442832 - 1446134 | 123114.0 |
| hybrid sensor histidine kinase/response regulator | DW204_05755 | Not Available | Positive | 1446546 - 1450484 | 149003.0 |
| beta-glucanase | DW204_05760 | Not Available | Negative | 1450554 - 1451705 | 43692.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

