Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein beta subunit/fixa family protein | DW204_05665 | Not Available | Negative | 1422770 - 1423657 | 31577.9 |
| tlpa family protein disulfide reductase | DW204_05670 | Not Available | Negative | 1423677 - 1424255 | 21871.7 |
| mechanosensitive ion channel family protein | DW204_05675 | Not Available | Positive | 1424340 - 1425554 | 45965.6 |
| dihydrolipoamide acyltransferase | DW204_05680 | Not Available | Positive | 1425561 - 1425929 | 12941.5 |
| transporter | DW204_05685 | Not Available | Negative | 1426213 - 1427811 | 56683.0 |
| helicase | DW204_05690 | Not Available | Negative | 1427889 - 1429781 | 72560.5 |
| dmt family transporter | DW204_05695 | Not Available | Negative | 1429774 - 1430703 | 33604.1 |
| atp-binding protein | DW204_05700 | Not Available | Positive | 1430822 - 1431646 | 31165.6 |
| duf4435 domain-containing protein | DW204_05705 | Not Available | Positive | 1431661 - 1432659 | 39358.6 |
| hypothetical protein | DW204_05710 | Not Available | Positive | 1432703 - 1433665 | 37989.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

