Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrophosphatase | DW204_05615 | Not Available | Positive | 1411036 - 1411356 | 12174.5 |
| deoxyribose-phosphate aldolase | DW204_05620 | Not Available | Positive | 1411362 - 1412303 | 34723.2 |
| abc transporter permease | DW204_05625 | Not Available | Positive | 1412946 - 1415294 | 89532.3 |
| abc transporter permease | DW204_05630 | Not Available | Positive | 1415329 - 1417713 | 90019.3 |
| hypothetical protein | DW204_05635 | Not Available | Negative | 1417917 - 1418333 | 16522.6 |
| hypothetical protein | DW204_05640 | Not Available | Negative | 1418524 - 1418925 | 14836.6 |
| sigma-70 family rna polymerase sigma factor | DW204_05645 | Not Available | Positive | 1419057 - 1419602 | 21257.2 |
| hypothetical protein | DW204_05650 | Not Available | Positive | 1419606 - 1419965 | 14338.9 |
| acyl-coa dehydrogenase | DW204_05655 | Not Available | Negative | 1420039 - 1421745 | 63956.9 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DW204_05660 | Not Available | Negative | 1421745 - 1422764 | 37023.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

