Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantetheine-phosphate adenylyltransferase | DW204_05565 | Not Available | Negative | 1399414 - 1399869 | 17442.1 |
| type iia dna topoisomerase subunit b | DW204_05570 | Not Available | Negative | 1399904 - 1401841 | 73273.1 |
| n-acetyltransferase | DW204_05575 | Not Available | Negative | 1401862 - 1402992 | 43789.4 |
| duf3810 domain-containing protein | DW204_05580 | Not Available | Negative | 1403308 - 1404270 | 37257.6 |
| hypothetical protein | DW204_05585 | Not Available | Positive | 1404457 - 1405689 | 44203.2 |
| rrna maturation rnase ybey | DW204_05590 | Not Available | Positive | 1405698 - 1406120 | 16149.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DW204_05595 | Not Available | Positive | 1406158 - 1408029 | 69569.9 |
| adenine phosphoribosyltransferase | DW204_05600 | Not Available | Positive | 1408087 - 1408611 | 19287.6 |
| excinuclease abc subunit uvrc | DW204_05605 | Not Available | Positive | 1408716 - 1410548 | 70303.5 |
| d-tyrosyl-trna(tyr) deacylase | DW204_05610 | Not Available | Positive | 1410581 - 1411033 | 16484.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

