Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | DW204_00420 | Not Available | Negative | 119296 - 120306 | 38978.1 |
| cation transporter | DW204_00425 | Not Available | Negative | 120311 - 121213 | 32572.5 |
| ribonuclease r | DW204_00430 | Not Available | Positive | 121362 - 123512 | 81624.2 |
| serine acetyltransferase | DW204_00435 | Not Available | Positive | 123811 - 124716 | 32867.4 |
| lactaldehyde reductase | DW204_00440 | Not Available | Negative | 124980 - 126134 | 40869.0 |
| rhamnulose-1-phosphate aldolase | DW204_00445 | Not Available | Negative | 126167 - 126976 | 30215.6 |
| l-rhamnose/proton symporter rhat | DW204_00450 | Not Available | Negative | 127003 - 128013 | 36541.5 |
| l-rhamnose isomerase | DW204_00455 | Not Available | Negative | 128079 - 129332 | 47630.7 |
| rhamnulokinase | DW204_00460 | Not Available | Negative | 129339 - 130817 | 54441.3 |
| arac family transcriptional regulator | DW204_00465 | Not Available | Positive | 130980 - 131873 | 34783.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

