Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | DW204_05465 | Not Available | Negative | 1377431 - 1378489 | 39300.4 |
| rhomboid family intramembrane serine protease | DW204_05470 | Not Available | Negative | 1378486 - 1379379 | 33892.7 |
| rhomboid family intramembrane serine protease | DW204_05475 | Not Available | Negative | 1379354 - 1380028 | 25245.5 |
| hypothetical protein | DW204_05480 | Not Available | Negative | 1380095 - 1380745 | 25813.7 |
| signal peptidase i | DW204_05485 | Not Available | Negative | 1380762 - 1381679 | 34675.8 |
| s26 family signal peptidase | DW204_05490 | Not Available | Negative | 1381683 - 1383107 | 55131.5 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DW204_05495 | Not Available | Negative | 1383110 - 1383865 | 27305.5 |
| duf2851 family protein | DW204_05500 | Not Available | Positive | 1383949 - 1385220 | 48949.6 |
| hypothetical protein | DW204_05505 | Not Available | Negative | 1385420 - 1386046 | 24355.5 |
| duf4249 domain-containing protein | DW204_05510 | Not Available | Negative | 1386129 - 1387166 | 39735.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

