Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenyl transferase | DW204_05210 | Not Available | Positive | 1295932 - 1296681 | 28669.5 |
| outer membrane protein assembly factor bama | DW204_05215 | Not Available | Positive | 1296691 - 1299342 | 101525.0 |
| omph family outer membrane protein | DW204_05220 | Not Available | Positive | 1299362 - 1299877 | 19244.2 |
| omph family outer membrane protein | DW204_05225 | Not Available | Positive | 1299957 - 1300511 | 21071.3 |
| glutamate racemase | DW204_05230 | Not Available | Positive | 1300615 - 1301460 | 31753.3 |
| beta-glucosidase bglx | DW204_05235 | Not Available | Negative | 1301529 - 1303814 | 83444.3 |
| Trna-arg | Not Available | Not Available | Positive | 1304134 - 1304208 | Not Available |
| 30s ribosomal protein s15 | DW204_05245 | Not Available | Negative | 1304273 - 1304542 | 10383.6 |
| translational gtpase typa | DW204_05250 | Not Available | Positive | 1304801 - 1306603 | 67447.5 |
| lta synthase family protein | DW204_05255 | Not Available | Negative | 1306689 - 1308662 | 75649.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

