Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpx | DW204_05160 | Not Available | Positive | 1279262 - 1280512 | 46650.6 |
| dna helicase recq | DW204_05165 | Not Available | Positive | 1280655 - 1282838 | 82051.4 |
| imp dehydrogenase | DW204_05170 | Not Available | Positive | 1283002 - 1284477 | 52647.8 |
| hypothetical protein | DW204_05175 | Not Available | Positive | 1284602 - 1285909 | 50642.8 |
| peptidylprolyl isomerase | DW204_05180 | Not Available | Positive | 1285986 - 1287344 | 51866.9 |
| hypothetical protein | DW204_05185 | Not Available | Positive | 1287344 - 1289041 | 64728.6 |
| hypothetical protein | DW204_05190 | Not Available | Positive | 1289045 - 1289341 | 11633.4 |
| dna mismatch repair endonuclease mutl | DW204_05195 | Not Available | Positive | 1289338 - 1291395 | 75786.5 |
| glycoside hydrolase family 97 protein | DW204_05200 | Not Available | Negative | 1292268 - 1294160 | 71072.3 |
| hypothetical protein | DW204_05205 | Not Available | Positive | 1294534 - 1295922 | 51398.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

