Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain AM17-44 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | DW204_05060 | Not Available | Positive | 1251665 - 1252273 | 23426.6 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | DW204_05065 | Not Available | Positive | 1252290 - 1253036 | 26089.5 |
| rna pseudouridine synthase | DW204_05070 | Not Available | Positive | 1253121 - 1253792 | 25443.8 |
| sigma-54-dependent fis family transcriptional regulator | DW204_05075 | Not Available | Negative | 1254082 - 1255434 | 50728.6 |
| response regulator | DW204_05080 | Not Available | Negative | 1255476 - 1258004 | 95360.0 |
| mate family efflux transporter | DW204_05085 | Not Available | Negative | 1258008 - 1259333 | 48745.7 |
| insulinase family protein | DW204_05090 | Not Available | Negative | 1259330 - 1260568 | 47288.8 |
| peptidylprolyl isomerase | DW204_05095 | Not Available | Negative | 1260581 - 1261420 | 30947.2 |
| dna-binding protein | DW204_05100 | Not Available | Negative | 1261488 - 1262129 | 24251.0 |
| hypothetical protein | DW204_05105 | Not Available | Negative | 1262350 - 1263942 | 62004.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

