Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | strain AM22-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032444 bp
Thymine Count
1038501 bp
Guanine Count
844315 bp
Cytosine Count
840116 bp
Genome Length
3756228 bp
Protein-coding Genes
3070 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dj-1/pfpi family protein | DW250_04140 | Not Available | Positive | 1008252 - 1008824 | 20610.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DW250_04145 | Not Available | Positive | 1008892 - 1009560 | 24852.6 |
| sigma-70 family rna polymerase sigma factor | DW250_04150 | Not Available | Negative | 1009730 - 1010302 | 22394.1 |
| hypothetical protein | DW250_04155 | Not Available | Negative | 1010420 - 1010686 | 10177.3 |
| pectate lyase | DW250_04160 | Not Available | Negative | 1010715 - 1013396 | 100838.0 |
| polysaccharide lyase | DW250_04165 | Not Available | Negative | 1013516 - 1015264 | 64841.8 |
| helix-turn-helix domain-containing protein | DW250_04170 | Not Available | Positive | 1015505 - 1015984 | 17943.7 |
| hypothetical protein | DW250_04175 | Not Available | Positive | 1016048 - 1016251 | 7478.79 |
| ragb/susd family nutrient uptake outer membrane protein | DW250_04180 | Not Available | Negative | 1016693 - 1018759 | 77055.6 |
| tonb-dependent receptor | DW250_04185 | Not Available | Negative | 1018783 - 1021956 | 116786.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
