Segatella copri DSM 18205

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri DSM 18205 is a Gram-negative, anaerobic bacterium that has garnered interest for its unique metabolic properties. As an anaerobe, S. copri thrives in environments devoid of oxygen, utilizing fermentation pathways to generate energy. The Gram-negative classification indicates a distinctive cell wall structure, which consists of a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides, a feature that can influence its interactions with other microorganisms and the host environment. The specific ecological niches inhabited by S. copri remain to be fully elucidated; however, its anaerobic nature suggests a preference for environments such as the gastrointestinal tract, where oxygen levels are low, and fermentation is a primary metabolic mode. Such habitats may provide S. copri with access to a diverse array of substrates for metabolism. The presence of S. copri in mixed microbial communities may play a role in the complex interactions within anaerobic ecosystems. Its capacity to engage in fermentation could contribute to the overall metabolic diversity of these communities, potentially influencing nutrient cycling and microbial dynamics. Moreover, the understanding of S. copri's role in anaerobic environments may shed light on the broader ecological functions of Gram-negative anaerobes in various biomes, particularly within the human microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainDSM 18205

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri DSM 18205


Gene Summary

Adenine Count

976377 bp

Thymine Count

958082 bp

Guanine Count

771364 bp

Cytosine Count

802050 bp

Genome Length

3507873 bp

Protein-coding Genes

3337 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+313 - 424Not Available
hypothetical proteinPREVCOP_03500Not Available+365 - 64310690.2
hypothetical proteinPREVCOP_03501Not Available+664 - 157833829.4
16s ribosomal rnaNot AvailableNot Available+1230 - 2749Not Available
hypothetical proteinPREVCOP_03502Not Available+1640 - 255432892.8
hypothetical proteinPREVCOP_03503Not Available+2588 - 357135416.0
hypothetical proteinPREVCOP_03504Not Available+3603 - 508153272.2
hypothetical proteinPREVCOP_03505Not Available-5245 - 615635647.9
hypothetical proteinPREVCOP_03506Not Available+6597 - 68007684.57
n-acetylmuramoyl-l-alanine amidasePREVCOP_03507Not Available-7099 - 752716094.4

Displaying genes 1 – 10 of 3411 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites