Segatella copri strain AM22-1

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AM22-1 is a Gram-negative, anaerobic bacterium predominantly found in the gut environment. This strain contributes to the complex microbial ecosystem of the gastrointestinal tract, where it plays a role in various biochemical processes associated with digestion and metabolism. As an anaerobe, Segatella copri strain AM22-1 thrives in low-oxygen conditions, which are typical of the gut habitat, allowing it to establish a niche that may influence the overall microbial community structure. The presence of Segatella copri strain AM22-1 in the gut suggests its potential involvement in metabolic pathways that could impact host physiology, including the fermentation of dietary fibers and the production of short-chain fatty acids, which are crucial for gut health. While specific functional traits of this strain remain to be elucidated, its adaptation to the anaerobic gut environment underscores its importance in maintaining homeostasis within the microbial ecosystem. Further studies may reveal insights into how Segatella copri strain AM22-1 interacts with other gut microbes and contributes to the host's metabolic functions, ultimately enhancing our understanding of gut microbiota dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AM22-1

Accession NumberQRIN00000000.1

Gene Summary

Adenine Count

1032444 bp

Thymine Count

1038501 bp

Guanine Count

844315 bp

Cytosine Count

840116 bp

Genome Length

3756228 bp

Protein-coding Genes

3070 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+13 - 1541Not Available
5s ribosomal rnaNot AvailableNot Available+181 - 293Not Available
23s ribosomal rnaNot AvailableNot Available+340 - 3238Not Available
duf4143 domain-containing proteinDW250_00005Not Available+352 - 171951415.4
Ncrna_class:rnase_p_rnaNot AvailableNot Available+2654 - 3084Not Available
hypothetical proteinDW250_00010Not Available+2668 - 29079332.21
hypothetical proteinDW250_00015Not Available+3027 - 354218820.0
5s ribosomal rnaNot AvailableNot Available+3344 - 3456Not Available
5s ribosomal rnaNot AvailableNot Available+3493 - 3605Not Available
hypothetical proteinDW250_00020Not Available-3631 - 469540309.3

Displaying genes 1 – 10 of 3154 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites