Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nutrimenti strain DSM 27372
Accession NumberQKLU00000000.1
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_1011 | Not Available | + | 1 - 1063 | 39520.0 |
| ipt/tig domain-containing protein | B0O44_1012 | Not Available | + | 1097 - 3307 | 76572.7 |
| crp-like camp-binding protein | B0O44_1013 | Not Available | - | 3368 - 4348 | 37181.1 |
| gliding motility-associated-like protein | B0O44_1014 | Not Available | + | 4487 - 8371 | 136434.0 |
| type ix secretion system porp/sprf family membrane protein | B0O44_1015 | Not Available | + | 8398 - 9288 | 32394.4 |
| hypothetical protein | B0O44_1016 | Not Available | + | 9433 - 10233 | 29045.5 |
| carboxypeptidase-like protein | B0O44_1017 | Not Available | + | 10274 - 13108 | 104496.0 |
| hypothetical protein | B0O44_1018 | Not Available | + | 13352 - 13531 | 6483.83 |
| cytochrome c-type biogenesis protein ccsb | B0O44_1019 | Not Available | - | 13601 - 16837 | 120569.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_10110 | Not Available | + | 17141 - 17710 | 22238.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.