Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 1 - 55 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 35 - 1910 | 18.01 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 58 - 1583 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 139 - 250 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 144 - 255 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 186 - 297 | 18.01 |
| acyl-[acyl-carrier-protein] desaturase | SAMN04488101_1012 | Not Available | Positive | 708 - 1688 | 37920.3 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 1038 - 1075 | 18.01 |
| methylmalonyl-coa mutase | SAMN04488101_1013 | Not Available | Negative | 1772 - 5164 | 126833.0 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN04488101_1014 | Not Available | Negative | 5313 - 6980 | 62100.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
