Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_10234 | Not Available | Negative | 1127288 - 1128676 | 52315.2 |
| hypothetical protein | B0O44_10235 | Not Available | Negative | 1128713 - 1129159 | 16845.8 |
| atp-dependent clp protease atp-binding subunit clpa | B0O44_10236 | Not Available | Negative | 1129228 - 1131744 | 94073.8 |
| hypothetical protein | B0O44_10237 | Not Available | Negative | 1131754 - 1134111 | 88586.0 |
| hypothetical protein | B0O44_10238 | Not Available | Negative | 1134122 - 1135069 | 35332.9 |
| hypothetical protein | B0O44_10239 | Not Available | Negative | 1135098 - 1135589 | 19118.8 |
| hypothetical protein | B0O44_10240 | Not Available | Negative | 1135593 - 1136114 | 20134.5 |
| gene 25-like lysozyme | B0O44_10241 | Not Available | Positive | 1136252 - 1136686 | 17045.4 |
| hypothetical protein | B0O44_10242 | Not Available | Positive | 1137036 - 1138892 | 70648.3 |
| type vi secretion system (t6ss) vasb/imph family protein | B0O44_10243 | Not Available | Negative | 1138883 - 1139818 | 35706.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

