Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | B0O44_10214 | Not Available | Negative | 1108403 - 1109257 | 31813.1 |
| hypothetical protein | B0O44_10215 | Not Available | Negative | 1109257 - 1109964 | 26521.4 |
| hypothetical protein | B0O44_10216 | Not Available | Positive | 1110293 - 1110451 | 5848.32 |
| hypothetical protein | B0O44_10217 | Not Available | Positive | 1110448 - 1111818 | 53319.0 |
| glucan phosphoethanolaminetransferase (alkaline phosphatase superfamily) | B0O44_10218 | Not Available | Positive | 1111773 - 1113161 | 54186.6 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_10219 | Not Available | Negative | 1113229 - 1113777 | 21838.8 |
| helix-turn-helix protein | B0O44_10220 | Not Available | Positive | 1114059 - 1114532 | 17756.3 |
| hypothetical protein | B0O44_10221 | Not Available | Negative | 1114529 - 1115302 | 28708.8 |
| hypothetical protein | B0O44_10222 | Not Available | Negative | 1115317 - 1115952 | 23839.6 |
| hypothetical protein | B0O44_10223 | Not Available | Negative | 1115964 - 1116608 | 23887.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

