Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf1826 | B0O44_101930 | Not Available | Positive | 1083248 - 1083946 | 26602.5 |
| hxlr family transcriptional regulator | B0O44_101931 | Not Available | Negative | 1083969 - 1084325 | 13466.7 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | B0O44_101932 | Not Available | Positive | 1084420 - 1085157 | 25658.3 |
| doxx-like protein | B0O44_101933 | Not Available | Negative | 1085171 - 1085521 | 12858.9 |
| wd40 repeat protein | B0O44_101934 | Not Available | Negative | 1085518 - 1087470 | 72407.7 |
| type ix secretion system porp/sprf family membrane protein | B0O44_101935 | Not Available | Negative | 1087494 - 1088507 | 37977.8 |
| putative repeat protein (tigr01451 family)/gliding motility-associated-like protein | B0O44_101936 | Not Available | Negative | 1088547 - 1091839 | 113608.0 |
| nucleoside-diphosphate-sugar epimerase | B0O44_1021 | Not Available | Negative | 1092008 - 1092931 | 34767.9 |
| hypothetical protein | B0O44_1022 | Not Available | Negative | 1092915 - 1094126 | 45601.6 |
| cdp-paratose 2-epimerase | B0O44_1023 | Not Available | Negative | 1094108 - 1095160 | 39940.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

