Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_101920 | Not Available | Negative | 1075501 - 1076169 | 23830.8 |
| haloalkane dehalogenase | B0O44_101921 | Not Available | Negative | 1076290 - 1077255 | 36766.8 |
| dna-binding marr family transcriptional regulator | B0O44_101922 | Not Available | Positive | 1077376 - 1077969 | 22351.2 |
| cubico group peptidase (beta-lactamase class c family) | B0O44_101923 | Not Available | Negative | 1078124 - 1079233 | 41322.3 |
| dinb family protein | B0O44_101924 | Not Available | Negative | 1079274 - 1079825 | 21372.0 |
| crp-like camp-binding protein | B0O44_101925 | Not Available | Negative | 1079881 - 1080423 | 21003.8 |
| hypothetical protein | B0O44_101926 | Not Available | Positive | 1080750 - 1081082 | 11240.6 |
| hypothetical protein | B0O44_101927 | Not Available | Positive | 1081170 - 1082000 | 31912.4 |
| hypothetical protein | B0O44_101928 | Not Available | Positive | 1081987 - 1082742 | 29451.5 |
| putative oxidoreductase | B0O44_101929 | Not Available | Positive | 1082745 - 1083182 | 16244.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

