Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper chaperone copz | B0O44_101910 | Not Available | Positive | 1067169 - 1067774 | 21776.5 |
| hypothetical protein | B0O44_101911 | Not Available | Negative | 1067798 - 1068049 | 9714.08 |
| hypothetical protein | B0O44_101912 | Not Available | Positive | 1068105 - 1068281 | 6319.81 |
| hypothetical protein | B0O44_101913 | Not Available | Positive | 1068327 - 1068494 | 6407.49 |
| putative metalloprotease with pdz domain | B0O44_101914 | Not Available | Positive | 1068771 - 1070300 | 58205.3 |
| alkanesulfonate monooxygenase ssud/methylene tetrahydromethanopterin reductase-like flavin-dependent oxidoreductase (luciferase family) | B0O44_101915 | Not Available | Positive | 1070462 - 1071484 | 37656.7 |
| pyridine nucleotide-disulfide oxidoreductase | B0O44_101916 | Not Available | Positive | 1071432 - 1072589 | 42624.5 |
| hypothetical protein | B0O44_101917 | Not Available | Negative | 1072586 - 1072972 | 13931.8 |
| serine aminopeptidase s33 family | B0O44_101918 | Not Available | Negative | 1073138 - 1074316 | 43169.1 |
| arac-like dna-binding protein | B0O44_101919 | Not Available | Positive | 1074465 - 1075415 | 36478.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

