Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_10178 | Not Available | Positive | 116324 - 116611 | 10806.0 |
| large subunit ribosomal protein l31 | B0O44_10179 | Not Available | Positive | 116702 - 116950 | 9761.7 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | B0O44_10180 | Not Available | Positive | 117022 - 118197 | 43481.6 |
| triosephosphate isomerase | B0O44_10181 | Not Available | Positive | 118236 - 118997 | 27419.6 |
| ribosomal protein l11 methyltransferase | B0O44_10182 | Not Available | Positive | 118997 - 119836 | 31531.5 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | B0O44_10183 | Not Available | Positive | 119860 - 121212 | 50652.1 |
| helix-turn-helix protein | B0O44_10184 | Not Available | Positive | 121250 - 121579 | 12598.2 |
| hypothetical protein | B0O44_10185 | Not Available | Negative | 121586 - 122704 | 43207.9 |
| hypothetical protein | B0O44_10186 | Not Available | Negative | 122775 - 122978 | 7939.66 |
| two component regulator with propeller domain | B0O44_10187 | Not Available | Negative | 123374 - 126325 | 112660.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

