Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | B0O44_101880 | Not Available | Positive | 1032373 - 1033809 | 54365.8 |
| uncharacterized protein duf4180 | B0O44_101881 | Not Available | Negative | 1033831 - 1034190 | 13610.3 |
| hypothetical protein | B0O44_101882 | Not Available | Negative | 1034207 - 1035271 | 39442.4 |
| dna-binding marr family transcriptional regulator | B0O44_101883 | Not Available | Negative | 1035246 - 1035644 | 14488.8 |
| pkd domain-containing protein | B0O44_101884 | Not Available | Negative | 1036067 - 1036831 | 27889.1 |
| rimj/riml family protein n-acetyltransferase | B0O44_101885 | Not Available | Negative | 1036933 - 1037487 | 21252.3 |
| hypothetical protein | B0O44_101886 | Not Available | Positive | 1037658 - 1038218 | 20965.7 |
| uncharacterized protein duf2809 | B0O44_101887 | Not Available | Negative | 1038210 - 1038623 | 15067.1 |
| uncharacterized protein duf4287 | B0O44_101888 | Not Available | Positive | 1038793 - 1039023 | 8593.3 |
| signal transduction histidine kinase | B0O44_101889 | Not Available | Negative | 1039039 - 1041132 | 79851.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

