Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf4337 | B0O44_101870 | Not Available | Negative | 1026382 - 1026897 | 19193.2 |
| pentapeptide repeat protein | B0O44_101871 | Not Available | Negative | 1026958 - 1027539 | 22006.2 |
| uncharacterized protein duf3995 | B0O44_101872 | Not Available | Negative | 1027549 - 1027983 | 16052.1 |
| hypothetical protein | B0O44_101873 | Not Available | Positive | 1028318 - 1028749 | 16263.5 |
| arac-like dna-binding protein | B0O44_101874 | Not Available | Positive | 1028742 - 1029593 | 33008.7 |
| hypothetical protein | B0O44_101875 | Not Available | Negative | 1029603 - 1030289 | 26599.8 |
| putative dna-binding protein (mmcq/yjbr family) | B0O44_101876 | Not Available | Positive | 1030422 - 1030775 | 13591.3 |
| nudix domain-containing protein | B0O44_101877 | Not Available | Positive | 1030851 - 1031291 | 16560.9 |
| ribosomal-protein-serine acetyltransferase | B0O44_101878 | Not Available | Negative | 1031269 - 1031808 | 20487.8 |
| uncharacterized protein yndb with ahsa1/start domain | B0O44_101879 | Not Available | Positive | 1031894 - 1032349 | 17072.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

