Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_101850 | Not Available | Positive | 1005480 - 1006607 | 43636.3 |
| hygromycin-b 4-o-kinase | B0O44_101851 | Not Available | Positive | 1006654 - 1007565 | 36147.9 |
| low affinity fe/cu permease | B0O44_101852 | Not Available | Negative | 1007569 - 1008021 | 17043.5 |
| uncharacterized protein duf4783 | B0O44_101853 | Not Available | Positive | 1008350 - 1008802 | 16228.6 |
| l,d-transpeptidase-like protein | B0O44_101854 | Not Available | Positive | 1008942 - 1009721 | 28391.9 |
| hypothetical protein | B0O44_101855 | Not Available | Negative | 1009728 - 1010189 | 16824.8 |
| putative alkp superfamily pyrophosphatase or phosphodiesterase | B0O44_101856 | Not Available | Positive | 1010598 - 1011863 | 47536.8 |
| caax prenyl protease-like protein | B0O44_101857 | Not Available | Positive | 1011998 - 1012459 | 17339.6 |
| cpa1 family monovalent cation:h+ antiporter | B0O44_101858 | Not Available | Positive | 1012512 - 1013759 | 45269.0 |
| uncharacterized protein yndb with ahsa1/start domain | B0O44_101859 | Not Available | Positive | 1013846 - 1014274 | 16047.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

