Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd-like starch-binding protein associating with outer membrane | B0O44_101830 | Not Available | Negative | 984307 - 985836 | 56739.0 |
| tonb-linked susc/raga family outer membrane protein | B0O44_101831 | Not Available | Negative | 985862 - 988987 | 112572.0 |
| arac-like dna-binding protein | B0O44_101832 | Not Available | Negative | 989332 - 990264 | 35959.7 |
| amidohydrolase family protein | B0O44_101833 | Not Available | Negative | 990358 - 991944 | 59749.6 |
| bon domain-containing protein | B0O44_101834 | Not Available | Positive | 992326 - 992787 | 16211.0 |
| sh3 domain-containing protein | B0O44_101835 | Not Available | Positive | 992796 - 993218 | 15178.6 |
| putative membrane protein | B0O44_101836 | Not Available | Negative | 993277 - 993777 | 18242.5 |
| uncharacterized protein ybjt (duf2867 family) | B0O44_101837 | Not Available | Negative | 993798 - 994643 | 30800.5 |
| arac-like dna-binding protein | B0O44_101838 | Not Available | Negative | 994707 - 995522 | 30897.9 |
| Trna-leu | Not Available | Not Available | Positive | 995681 - 995765 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

