Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_101820 | Not Available | Negative | 968725 - 970524 | 68209.4 |
| hypothetical protein | B0O44_101821 | Not Available | Negative | 970527 - 972662 | 81089.3 |
| putative membrane protein (tigr02226 family) | B0O44_101822 | Not Available | Negative | 972659 - 974056 | 52685.0 |
| uncharacterized protein duf58 | B0O44_101823 | Not Available | Negative | 974069 - 974956 | 34167.0 |
| moxr-like atpase | B0O44_101824 | Not Available | Negative | 974956 - 975960 | 37257.5 |
| uncharacterized protein duf4159 | B0O44_101825 | Not Available | Positive | 976105 - 976734 | 24354.6 |
| apa family basic amino acid/polyamine antiporter | B0O44_101826 | Not Available | Negative | 976731 - 978161 | 52121.9 |
| hypothetical protein | B0O44_101827 | Not Available | Negative | 978190 - 981096 | 109651.0 |
| carboxypeptidase c (cathepsin a) | B0O44_101828 | Not Available | Negative | 981119 - 982750 | 60999.5 |
| carboxypeptidase c (cathepsin a) | B0O44_101829 | Not Available | Negative | 982758 - 984287 | 57283.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

