Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_101810 | Not Available | Negative | 955206 - 955553 | 13300.3 |
| arac-like dna-binding protein | B0O44_101811 | Not Available | Negative | 955829 - 956728 | 34764.8 |
| hypothetical protein | B0O44_101812 | Not Available | Negative | 957102 - 957599 | 17437.9 |
| susd-like starch-binding protein associating with outer membrane | B0O44_101813 | Not Available | Negative | 957615 - 959069 | 53214.3 |
| tonb-linked susc/raga family outer membrane protein | B0O44_101814 | Not Available | Negative | 959078 - 962107 | 109202.0 |
| signal transduction histidine kinase | B0O44_101815 | Not Available | Positive | 962475 - 963419 | 36502.1 |
| luxr family two component transcriptional regulator | B0O44_101816 | Not Available | Positive | 963406 - 964035 | 23395.1 |
| tldd protein | B0O44_101817 | Not Available | Negative | 964032 - 965663 | 60072.7 |
| putative zn-dependent protease | B0O44_101818 | Not Available | Negative | 965684 - 967000 | 47696.6 |
| tldd protein | B0O44_101819 | Not Available | Negative | 967003 - 968640 | 59849.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

