Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane starch-binding protein | B0O44_101800 | Not Available | Negative | 936674 - 938371 | 63643.2 |
| tonb-linked susc/raga family outer membrane protein | B0O44_101801 | Not Available | Negative | 938376 - 941522 | 115453.0 |
| 7tmr-dism extracellular protein 2 | B0O44_101802 | Not Available | Negative | 942048 - 943823 | 69842.2 |
| trehalose utilization protein | B0O44_101803 | Not Available | Positive | 944251 - 945804 | 59245.1 |
| hypothetical protein | B0O44_101804 | Not Available | Positive | 946151 - 946690 | 20474.8 |
| rna polymerase primary sigma factor | B0O44_101805 | Not Available | Negative | 946685 - 947542 | 32426.4 |
| surface antigen-like protein | B0O44_101806 | Not Available | Negative | 947769 - 949103 | 50169.6 |
| calcineurin-like phosphoesterase family protein | B0O44_101807 | Not Available | Negative | 949060 - 951027 | 75892.1 |
| type 1 glutamine amidotransferase | B0O44_101808 | Not Available | Negative | 951131 - 953608 | 93764.4 |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | B0O44_101809 | Not Available | Positive | 953927 - 955189 | 49660.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

