Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloramphenicol o-acetyltransferase type a | B0O44_101790 | Not Available | Negative | 919990 - 920625 | 24317.3 |
| arac-like dna-binding protein | B0O44_101791 | Not Available | Positive | 920759 - 921739 | 37316.7 |
| chitinase | B0O44_101792 | Not Available | Negative | 921731 - 922852 | 41434.1 |
| glycosyl hydrolase family 88 | B0O44_101793 | Not Available | Negative | 922852 - 924024 | 44096.1 |
| hypothetical protein | B0O44_101794 | Not Available | Negative | 924031 - 925536 | 55815.5 |
| alginate lyase | B0O44_101795 | Not Available | Negative | 925539 - 926759 | 46330.1 |
| beta-galactosidase | B0O44_101796 | Not Available | Negative | 926761 - 929517 | 103978.0 |
| beta-glucosidase | B0O44_101797 | Not Available | Negative | 929522 - 931741 | 80745.5 |
| putative outer membrane starch-binding protein | B0O44_101798 | Not Available | Negative | 931847 - 933571 | 63756.6 |
| tonb-linked susc/raga family outer membrane protein | B0O44_101799 | Not Available | Negative | 933582 - 936668 | 114039.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

